STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103142589Si:dkey-51e6.1. (143 aa)    
Predicted Functional Partners:
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
    0.754
ndufs7
NADH:ubiquinone oxidoreductase core subunit S7; Belongs to the complex I 20 kDa subunit family.
   
    0.714
ndufb7
NADH:ubiquinone oxidoreductase subunit B7.
   
    0.704
clpp
ATP-dependent Clp protease proteolytic subunit.
   
    0.643
ndufa7
Uncharacterized protein.
   
    0.634
ENSPFOP00000020496
Mitochondrial ribosomal protein L41.
   
  
 0.523
ENSPFOP00000017711
NADH:ubiquinone oxidoreductase subunit B11.
   
    0.502
tmem147
Transmembrane protein 147.
   
    0.502
NDUFS8
NADH:ubiquinone oxidoreductase core subunit S8.
   
    0.501
LOC107837858
Uncharacterized protein.
   
    0.501
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.