STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103133777Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. (175 aa)    
Predicted Functional Partners:
amt
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
 
 0.997
gldc
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
 
 0.996
shmt2
Serine hydroxymethyltransferase 2 (mitochondrial).
  
 
 0.982
SHMT2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.982
dmgdh
Dimethylglycine dehydrogenase.
  
 0.977
pdpr
Pyruvate dehydrogenase phosphatase regulatory subunit.
  
 0.977
sardh
Sarcosine dehydrogenase.
  
 0.977
ENSPFOP00000010001
Serine--pyruvate aminotransferase.
  
 
 0.968
LOC103130135
Serine--pyruvate aminotransferase.
  
 
 0.968
ENSPFOP00000007624
Lipoyltransferase 1.
   
 0.966
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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