Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASS1 | ENSPFOP00000002501 | ENSPFOP00000019970 | ENSPFOP00000002501 | Argininosuccinate synthase 1. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.666 |
ASS1 | ENSPFOP00000008893 | ENSPFOP00000019970 | ENSPFOP00000008893 | Argininosuccinate synthase 1. | Argininosuccinate lyase. | 0.999 |
ASS1 | ENSPFOP00000018959 | ENSPFOP00000019970 | ENSPFOP00000018959 | Argininosuccinate synthase 1. | Si:ch211-157p22.10. | 0.967 |
ASS1 | LOC103131426 | ENSPFOP00000019970 | ENSPFOP00000023773 | Argininosuccinate synthase 1. | Cytochrome b5 reductase 4. | 0.705 |
ASS1 | LOC103140249 | ENSPFOP00000019970 | ENSPFOP00000017856 | Argininosuccinate synthase 1. | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.612 |
ASS1 | oxnad1 | ENSPFOP00000019970 | ENSPFOP00000003025 | Argininosuccinate synthase 1. | Oxidoreductase NAD-binding domain containing 1. | 0.612 |
ASS1 | ppat | ENSPFOP00000019970 | ENSPFOP00000017053 | Argininosuccinate synthase 1. | Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.908 |
ASS1 | umps | ENSPFOP00000019970 | ENSPFOP00000004731 | Argininosuccinate synthase 1. | Uridine monophosphate synthetase. | 0.598 |
ENSPFOP00000002501 | ASS1 | ENSPFOP00000002501 | ENSPFOP00000019970 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Argininosuccinate synthase 1. | 0.666 |
ENSPFOP00000002501 | ENSPFOP00000008893 | ENSPFOP00000002501 | ENSPFOP00000008893 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Argininosuccinate lyase. | 0.602 |
ENSPFOP00000002501 | ENSPFOP00000018959 | ENSPFOP00000002501 | ENSPFOP00000018959 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Si:ch211-157p22.10. | 0.934 |
ENSPFOP00000002501 | LOC103131426 | ENSPFOP00000002501 | ENSPFOP00000023773 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Cytochrome b5 reductase 4. | 0.570 |
ENSPFOP00000002501 | LOC103140249 | ENSPFOP00000002501 | ENSPFOP00000017856 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.516 |
ENSPFOP00000002501 | dhodh | ENSPFOP00000002501 | ENSPFOP00000026592 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.795 |
ENSPFOP00000002501 | dpyd | ENSPFOP00000002501 | ENSPFOP00000005844 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family. | 0.795 |
ENSPFOP00000002501 | oxnad1 | ENSPFOP00000002501 | ENSPFOP00000003025 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Oxidoreductase NAD-binding domain containing 1. | 0.516 |
ENSPFOP00000002501 | ppat | ENSPFOP00000002501 | ENSPFOP00000017053 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.999 |
ENSPFOP00000002501 | umps | ENSPFOP00000002501 | ENSPFOP00000004731 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Uridine monophosphate synthetase. | 0.968 |
ENSPFOP00000008893 | ASS1 | ENSPFOP00000008893 | ENSPFOP00000019970 | Argininosuccinate lyase. | Argininosuccinate synthase 1. | 0.999 |
ENSPFOP00000008893 | ENSPFOP00000002501 | ENSPFOP00000008893 | ENSPFOP00000002501 | Argininosuccinate lyase. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.602 |
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