STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103137613Small ArfGAP 1. (420 aa)    
Predicted Functional Partners:
arfgap1
ADP-ribosylation factor GTPase activating protein 1.
    
0.814
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 0.632
ENSPFOP00000009425
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 0.632
arfgap3
ADP-ribosylation factor GTPase activating protein 3.
   
0.614
arfgap2
ADP-ribosylation factor GTPase activating protein 2.
   
0.614
LOC103139499
Uncharacterized protein.
    
0.563
LOC103144225
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
    
0.563
ENSPFOP00000008428
ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a.
    
0.563
ENSPFOP00000010085
ArfGAP with coiled-coil, ankyrin repeat and PH domains 1.
    
0.563
ENSPFOP00000010206
Zgc:162872.
    
0.563
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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