STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000019303Tau tubulin kinase 2b. (998 aa)    
Predicted Functional Partners:
ltv1
LTV1 ribosome biogenesis factor.
    
 0.893
bysl
Bystin-like.
    
 0.845
ENSPFOP00000017152
RIO kinase 2 (yeast).
    
 0.842
TSR1
TSR1 ribosome maturation factor.
    
 0.816
ENSPFOP00000000026
NIN1 (RPN12) binding protein 1 homolog.
    
 0.770
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.748
LOC103130355
Period circadian clock 2.
    
 0.735
PER2
Period circadian regulator 2.
    
 0.735
LOC103143047
Period circadian clock 2.
    
 0.735
ENSPFOP00000011328
Period circadian clock 1b.
    
 0.735
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.