STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUBP3Far upstream element binding protein 3. (560 aa)    
Predicted Functional Partners:
ENSPFOP00000011138
Uncharacterized protein.
   
 
 0.698
PUF60
Poly-U binding splicing factor b.
   
 
 0.698
parn
Poly(A)-specific ribonuclease (deadenylation nuclease).
   
 0.664
ENSPFOP00000019946
Exosome component 2.
   
  0.660
LOC103144233
QKI, KH domain containing, RNA binding a.
   
 
 0.608
LOC103151187
QKI, KH domain containing, RNA binding 2.
   
 
 0.608
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.605
toe1
Target of EGR1, exonuclease.
   
 0.592
ENSPFOP00000000777
Non-specific serine/threonine protein kinase.
   
  0.580
LOC103145381
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
  0.580
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.