STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103134461Parvin, beta. (365 aa)    
Predicted Functional Partners:
ILK
Integrin linked kinase.
   
 0.992
ilk
Uncharacterized protein.
   
 0.988
LOC103141359
Paxillin; Cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion). Belongs to the paxillin family.
   
 0.965
ENSPFOP00000004666
Uncharacterized protein.
    
 0.925
actb
Uncharacterized protein.
    
 0.925
LOC103139392
LIM domain-containing protein.
   
 0.923
LOC103141489
LIM domain-containing protein.
   
 0.923
LOC103142160
Integrin beta; Belongs to the integrin beta chain family.
   
 0.921
LOC103138021
Integrin beta; Belongs to the integrin beta chain family.
   
 0.917
ENSPFOP00000029475
Integrin beta; Belongs to the integrin beta chain family.
   
 0.917
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.