STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000021913USP8_dimer domain-containing protein. (144 aa)    
Predicted Functional Partners:
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
    
 0.935
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.934
ubb
Ubiquitin B.
   
 0.931
rps27a
Ribosomal protein S27a.
   
 0.925
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.921
psmd6
Proteasome 26S subunit, non-ATPase 6.
   
 0.917
psmd13
Proteasome 26S subunit, non-ATPase 13.
   
 0.912
ENSPFOP00000013373
Proteasome 26S subunit, non-ATPase 12.
   
 0.908
psmd3
Proteasome 26S subunit, non-ATPase 3.
   
 0.900
STAMBPL1
STAM binding protein like 1.
 
      0.899
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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