STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000022094Mitochondrial calcium uniporter. (378 aa)    
Predicted Functional Partners:
micu1
Mitochondrial calcium uptake 1.
    
 0.954
micu2
Mitochondrial calcium uptake 2.
    
 0.917
ENSPFOP00000000761
Single-pass membrane protein with aspartate-rich tail 1a.
    
 0.912
ENSPFOP00000012486
Single-pass membrane protein with aspartate-rich tail 1b.
    
 0.912
LOC103139879
Mitochondrial calcium uptake family, member 3b.
     
 0.712
ENSPFOP00000007006
Mitochondrial calcium uptake family, member 3a.
     
 0.712
spg7
SPG7 matrix AAA peptidase subunit, paraplegin.
     
 0.661
LOC103156215
Prohibitin.
     
 0.656
PHB2
Prohibitin.
     
 0.656
phb
Prohibitin.
     
 0.638
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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