STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000022905Chitinase domain containing 1. (254 aa)    
Predicted Functional Partners:
ENSPFOP00000015912
WD repeat domain 90.
    
 
 0.828
ENSPFOP00000011350
PARK2 co-regulated.
    
 
 0.727
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
    
   0.720
ENSPFOP00000004125
Uncharacterized protein.
    
   0.720
ENSPFOP00000008684
EF-hand domain (C-terminal) containing 2.
    
 
 0.696
ENSPFOP00000019506
EF-hand domain (C-terminal) containing 1.
    
 
 0.696
cope
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
    0.675
LOC103154570
RAD21 cohesin complex component.
    
 
 0.632
ENSPFOP00000004552
RAD21 cohesin complex component like 1.
    
 
 0.632
LOC103135049
RAD21 cohesin complex component a.
    
 
 0.632
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.