STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000024596Uncharacterized protein. (489 aa)    
Predicted Functional Partners:
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
 
 0.626
zdhhc4
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.564
zdhhc20
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.558
ENSPFOP00000009613
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.558
zdhhc16
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.558
LOC103143480
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.558
LOC103141492
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.558
ENSPFOP00000025544
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.558
ENSPFOP00000029654
Zinc finger, DHHC-type containing 16b.
    
 
 0.558
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 
 0.544
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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