STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000024819Myosin IHa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (739 aa)    
Predicted Functional Partners:
ush1c
Usher syndrome 1C.
   
 0.665
anks4b
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.651
LOC103140944
Usher syndrome 1Ga (autosomal recessive).
   
 0.651
LOC103150873
Usher syndrome 1Gb (autosomal recessive).
   
 0.651
ENSPFOP00000006636
Whirlin a.
    
 0.621
ENSPFOP00000009122
Whirlin b.
    
 0.621
LOC103139535
Myosin, light chain 9a, regulatory.
    
 0.618
LOC103135689
Uncharacterized protein.
    
 0.618
LOC103149803
Uncharacterized protein.
    
 0.618
ENSPFOP00000025998
Myosin, light chain 7, regulatory.
    
 0.618
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.