STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000025727Solute carrier family 26 member 11. (530 aa)    
Predicted Functional Partners:
ENSPFOP00000017299
Uncharacterized protein; Belongs to the complex I LYR family.
    
 
 0.692
GATB
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
    
  0.662
ENSPFOP00000003275
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
  
   0.628
ENSPFOP00000001367
Leucine-rich repeat containing G protein-coupled receptor 4.
     
 0.612
LOC103139316
Leucine-rich repeat-containing G-protein coupled receptor 4.
     
 0.612
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
     
 0.612
ENSPFOP00000013015
Relaxin family peptide receptor 2a.
     
 0.612
rxfp1
Relaxin family peptide receptor 1.
     
 0.612
ENSPFOP00000009551
Heme-binding protein soul4.
   
 
 0.605
ENSPFOP00000017453
Uncharacterized protein.
   
 
 0.605
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.