STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103136950THAP-type domain-containing protein. (254 aa)    
Predicted Functional Partners:
ENSPFOP00000018125
PiggyBac transposable element derived 5.
    
 
 0.669
ENSPFOP00000000686
Adenylate kinase 9.
    
  0.589
ENSPFOP00000005078
BRCA1 associated RING domain 1.
    
  0.589
ENSPFOP00000028219
Uncharacterized protein.
    
  0.588
ENSPFOP00000014926
Uncharacterized protein.
   
 0.586
ENSPFOP00000014930
Mitochondrial ribosomal protein S2.
   
 0.586
LOC103147317
SET domain and mariner transposase fusion gene.
   
 0.565
mphosph6
M-phase phosphoprotein 6.
      
 0.563
sgk3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.548
YTHDC2
YTH domain containing 2.
    
  0.531
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.