STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000026619C2H2-type domain-containing protein. (689 aa)    
Predicted Functional Partners:
ENSPFOP00000025690
Uncharacterized protein.
 
     0.939
LOC103138264
Transforming growth factor beta; Belongs to the TGF-beta family.
    
  0.642
LOC103153586
Runt-related transcription factor.
     
 0.639
LOC103130586
Runt-related transcription factor.
     
 0.634
ENSPFOP00000016177
Runt-related transcription factor.
     
 0.634
ENSPFOP00000013771
Runt domain-containing protein.
     
 0.615
ENSPFOP00000004791
CUB and Sushi multiple domains 3a.
      
 0.608
CSMD1
CUB and Sushi multiple domains 1.
      
 0.608
bend3
Uncharacterized protein.
    
  0.474
fancc
FA complementation group C.
      
 0.470
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.