STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000027759Fraser extracellular matrix complex subunit 1. (4004 aa)    
Predicted Functional Partners:
ENSPFOP00000001347
Fras1 related extracellular matrix 1a.
   
0.928
ENSPFOP00000027842
C-type lectin domain-containing protein.
   
 0.928
ENSPFOP00000003541
Integrin, alpha 8; Belongs to the integrin alpha chain family.
   
 
 0.907
LOC103138021
Integrin beta; Belongs to the integrin beta chain family.
    
  0.907
itgb1
Integrin beta; Belongs to the integrin beta chain family.
    
  0.906
LOC103149452
FRAS1 related extracellular matrix 2b.
   
0.901
npnt
Nephronectin a.
   
 0.858
ENSPFOP00000004095
Uncharacterized protein.
     
 0.847
ENSPFOP00000016663
FRAS1 related extracellular matrix 2a.
   
0.845
frem3
Fras1 related extracellular matrix 3.
   
0.842
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.