STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000028787C-type lectin domain-containing protein. (238 aa)    
Predicted Functional Partners:
LOC103154503
Zmp:0000000846.
    
  0.460
LOC103141903
Tenascin C.
    
  0.460
ENSPFOP00000004699
Uncharacterized protein.
    
  0.460
tnn
Tenascin N.
    
  0.460
tnr
Tenascin R (restrictin, janusin).
    
  0.460
ENSPFOP00000023351
Fibronectin type-III domain-containing protein.
    
  0.460
ENSPFOP00000024873
Uncharacterized protein.
    
  0.460
ENSPFOP00000031277
annotation not available
    
  0.460
hapln1
Hyaluronan and proteoglycan link protein 1a.
    
  0.456
LOC103156159
Hyaluronan and proteoglycan link protein 1b.
    
  0.456
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.