STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103130411Uncharacterized protein. (172 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.911
ints1
Integrator complex subunit 1.
    
 0.909
ints13
Integrator complex subunit 13.
   
 0.891
ENSPFOP00000009990
Integrator complex subunit 3.
    
 0.873
ENSPFOP00000010194
Integrator complex subunit 5.
    
 0.873
ints10
Integrator complex subunit 10.
   
 0.868
ENSPFOP00000012308
Integrator complex subunit 9.
  
 0.806
ints11
Integrator complex subunit 11.
  
 0.800
ENSPFOP00000018355
Bardet-Biedl syndrome 9.
    
 0.799
bbs7
Bardet-Biedl syndrome 7.
    
 0.782
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.