STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103155328Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
LOC103150965
CD40 molecule, TNF receptor superfamily member 5.
  
 
 
0.657
LOC103155324
TNFR-Cys domain-containing protein.
  
 
 
0.635
ENSPFOP00000023509
Uncharacterized protein.
  
 
 
0.635
LOC103149726
Uncharacterized protein.
   
 
  0.488
ENSPFOP00000001741
Tumor necrosis factor receptor superfamily, member 11b.
   
 
  0.488
TNFRSF11B
TNF receptor superfamily member 11b.
   
 
 
0.488
ENSPFOP00000008496
TNFR-Cys domain-containing protein.
   
 
  0.488
ENSPFOP00000008503
TNFR-Cys domain-containing protein.
   
 
  0.488
ltbr
Uncharacterized protein.
   
 
 
0.488
TNFRSF11B-2
TNF receptor superfamily member 11b.
   
 
  0.488
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.