STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap69Uncharacterized protein. (878 aa)    
Predicted Functional Partners:
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
   0.842
polr3c
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.720
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
   0.720
ENSPFOP00000031126
Uncharacterized protein.
    
   0.720
ENSPFOP00000000035
Uncharacterized protein.
    
   0.610
ENSPFOP00000001645
Uncharacterized protein.
    
   0.610
mycbp
Uncharacterized protein.
    
   0.610
LOC103143464
MYC binding protein.
    
   0.610
ENSPFOP00000015134
Uncharacterized protein.
    
   0.610
ENSPFOP00000023996
Uncharacterized protein.
    
   0.610
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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