Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPFOP00000003275 | ENSPFOP00000030993 | ENSPFOP00000003275 | ENSPFOP00000030993 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Ig-like domain-containing protein. | 0.444 |
ENSPFOP00000003275 | pidd1 | ENSPFOP00000003275 | ENSPFOP00000011876 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | P53-induced death domain protein 1. | 0.456 |
ENSPFOP00000003275 | rad50 | ENSPFOP00000003275 | ENSPFOP00000003425 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | RAD50 homolog, double strand break repair protein. | 0.999 |
ENSPFOP00000007196 | ENSPFOP00000030993 | ENSPFOP00000007196 | ENSPFOP00000030993 | Corin, serine peptidase. | Ig-like domain-containing protein. | 0.489 |
ENSPFOP00000007196 | LOC103130943 | ENSPFOP00000007196 | ENSPFOP00000026099 | Corin, serine peptidase. | Fibronectin type-III domain-containing protein. | 0.660 |
ENSPFOP00000007196 | PTK7 | ENSPFOP00000007196 | ENSPFOP00000019384 | Corin, serine peptidase. | Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.872 |
ENSPFOP00000007196 | pidd1 | ENSPFOP00000007196 | ENSPFOP00000011876 | Corin, serine peptidase. | P53-induced death domain protein 1. | 0.635 |
ENSPFOP00000019318 | ENSPFOP00000030993 | ENSPFOP00000019318 | ENSPFOP00000030993 | Uncharacterized protein. | Ig-like domain-containing protein. | 0.436 |
ENSPFOP00000019318 | LOC103130943 | ENSPFOP00000019318 | ENSPFOP00000026099 | Uncharacterized protein. | Fibronectin type-III domain-containing protein. | 0.867 |
ENSPFOP00000019318 | PTK7 | ENSPFOP00000019318 | ENSPFOP00000019384 | Uncharacterized protein. | Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.924 |
ENSPFOP00000019318 | hgfac | ENSPFOP00000019318 | ENSPFOP00000006008 | Uncharacterized protein. | HGF activator. | 0.618 |
ENSPFOP00000019318 | pidd1 | ENSPFOP00000019318 | ENSPFOP00000011876 | Uncharacterized protein. | P53-induced death domain protein 1. | 0.779 |
ENSPFOP00000030993 | ENSPFOP00000003275 | ENSPFOP00000030993 | ENSPFOP00000003275 | Ig-like domain-containing protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.444 |
ENSPFOP00000030993 | ENSPFOP00000007196 | ENSPFOP00000030993 | ENSPFOP00000007196 | Ig-like domain-containing protein. | Corin, serine peptidase. | 0.489 |
ENSPFOP00000030993 | ENSPFOP00000019318 | ENSPFOP00000030993 | ENSPFOP00000019318 | Ig-like domain-containing protein. | Uncharacterized protein. | 0.436 |
ENSPFOP00000030993 | LOC103130943 | ENSPFOP00000030993 | ENSPFOP00000026099 | Ig-like domain-containing protein. | Fibronectin type-III domain-containing protein. | 0.445 |
ENSPFOP00000030993 | LOC103154418 | ENSPFOP00000030993 | ENSPFOP00000007585 | Ig-like domain-containing protein. | Interleukin-1. | 0.444 |
ENSPFOP00000030993 | PTK7 | ENSPFOP00000030993 | ENSPFOP00000019384 | Ig-like domain-containing protein. | Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.464 |
ENSPFOP00000030993 | cd79a | ENSPFOP00000030993 | ENSPFOP00000002699 | Ig-like domain-containing protein. | CD79a molecule, immunoglobulin-associated alpha. | 0.424 |
ENSPFOP00000030993 | hgfac | ENSPFOP00000030993 | ENSPFOP00000006008 | Ig-like domain-containing protein. | HGF activator. | 0.436 |
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