Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
traf3ip2SEFIR domain-containing protein. (330 aa)    
Predicted Functional Partners:
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.938
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.916
LOC106962807
CD40 molecule, TNF receptor superfamily member 5.
    
 
 0.837
LOC106948911
Serine/threonine-protein kinase; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family.
    
 
 0.794
LOC106947210
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.765
LOC106956159
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.765
traf2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.765
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 
 0.738
LOC106944810
Protein kinase domain-containing protein.
    
 
 0.738
nfkbia
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.
   
 0.734
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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