Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000000035Uncharacterized protein. (102 aa)    
Predicted Functional Partners:
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.999
nbr1
NBR1 autophagy cargo receptor a.
    
 0.999
map1lc3c
Microtubule-associated protein 1 light chain 3 gamma.
   
 0.999
map1lc3b
Microtubule-associated protein 1 light chain 3 beta.
   
 0.998
map1lc3a
Microtubule-associated protein 1 light chain 3 alpha.
   
 0.998
rps27a
Ribosomal protein S27a.
   
 0.998
LOC106939540
TANK-binding kinase 1.
    
 0.996
tax1bp1
Tax1 (human T-cell leukemia virus type I) binding protein 1b.
    
 0.992
LOC106949313
GABA type A receptor associated protein like 2.
   
 0.991
ENSPLAP00000008134
Uncharacterized protein.
   
 0.991
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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