Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000000036Uncharacterized protein. (62 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
rps23
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.995
rps11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 0.995
rps9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.995
rps6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.995
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.995
rps18
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 0.995
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.995
rps16
Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.995
rps2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.995
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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