STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106958565Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily. (204 aa)    
Predicted Functional Partners:
ENSPLAP00000002301
Selenoprotein F.
   
  
 0.573
eefsec
Eukaryotic elongation factor, selenocysteine-tRNA-specific.
   
  
 0.520
selenok
Selenoprotein K.
      
 0.516
selenom
Selenoprotein M.
      
 0.503
dhrs1
Dehydrogenase/reductase (SDR family) member 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.497
selenon
Selenoprotein N.
      
 0.493
selenoh
Uncharacterized protein.
      
 0.483
selenoi
Selenoprotein I; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.422
eif2s3
Eukaryotic translation initiation factor 2, subunit 3 gamma.
   
  
 0.413
ENSPLAP00000003112
SECIS binding protein 2.
   
 
 0.410
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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