Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106958534Myocardial zonula adherens protein. (651 aa)    
Predicted Functional Partners:
naa25
N(alpha)-acetyltransferase 25, NatB auxiliary subunit.
    
 
 0.600
LOC106961293
Troponin T type 3a (skeletal, fast).
   
 0.575
LOC106938408
Uncharacterized protein.
   
 0.575
gatd1
Glutamine amidotransferase like class 1 domain containing 1.
   
 0.575
tnnt1
Uncharacterized protein.
   
 0.575
ENSPLAP00000009737
Uncharacterized protein.
   
 0.575
LOC106954216
Troponin T type 2b (cardiac).
   
 0.575
ENSPLAP00000013162
Uncharacterized protein.
   
 0.575
ENSPLAP00000015682
Troponin T2c, cardiac.
   
 0.575
ENSPLAP00000016844
Uncharacterized protein.
   
 0.575
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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