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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106958524Solute carrier family 43 member 2a. (571 aa)    
Predicted Functional Partners:
tnn
Tenascin N.
   
  0.537
LOC106947211
Zmp:0000000846.
    
  0.469
ENSPLAP00000022184
Uncharacterized protein.
    
  0.469
ENSPLAP00000023646
Fibronectin type-III domain-containing protein.
    
  0.469
tnr
Tenascin R (restrictin, janusin).
    
  0.469
LOC106936774
Tenascin C.
    
  0.469
slc1a5
Amino acid transporter.
    
 
 0.452
hgfac
HGF activator.
    
  0.437
habp2
Uncharacterized protein.
    
  0.437
LOC106956981
Lysyl oxidase-like 2a.
  
 
  0.418
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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