Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
catipCiliogenesis associated TTC17 interacting protein. (299 aa)    
Predicted Functional Partners:
tpgs1
Uncharacterized protein.
      
 0.901
ENSPLAP00000013291
Uncharacterized protein.
    
 
 0.855
ENSPLAP00000022104
GAS domain-containing protein.
    
 
 0.855
LOC106936418
Tripartite motif containing 35-30.
   
   0.797
ENSPLAP00000012647
Cilia and flagella associated protein 299.
   
   0.788
lrrc74a
Leucine rich repeat containing 74A.
    
   0.780
ENSPLAP00000012886
Uncharacterized protein.
    
   0.780
cfap45
Cilia and flagella associated protein 45.
    
   0.780
C7orf31
Uncharacterized protein.
    
   0.780
brd9
Bromodomain containing 9.
    
   0.779
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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