Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000000099Endostatin domain-containing protein. (244 aa)    
Predicted Functional Partners:
RBM20
RNA binding motif protein 20.
    
 0.618
LOC106963485
C1q and TNF related 9.
    
  0.583
LOC106964138
Integrin beta; Belongs to the integrin beta chain family.
    
  0.577
itgb1
Integrin beta; Belongs to the integrin beta chain family.
    
  0.577
LOC106949493
Integrin beta.
    
  0.577
LOC106964795
Uncharacterized protein.
    
 
 0.566
ncl
Nucleolin.
    
 
 0.566
LOC106955062
Integrin, alpha 5 (fibronectin receptor, alpha polypeptide); Belongs to the integrin alpha chain family.
    
 0.541
LOC106951149
Integrin, alpha 2b; Belongs to the integrin alpha chain family.
    
 0.541
LOC106955164
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.541
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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