STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000000397Fibrinogen C-terminal domain-containing protein. (232 aa)    
Predicted Functional Partners:
sigirr
Single immunoglobulin and toll-interleukin 1 receptor (TIR) domain.
    
 0.645
kansl2
KAT8 regulatory NSL complex subunit 2.
    
  0.596
fbln5
Fibulin 5.
   
 0.567
met
MET proto-oncogene, receptor tyrosine kinase.
   
 
  0.553
LOC106949456
Macrophage stimulating 1 receptor a.
   
 
  0.553
mst1r
Macrophage stimulating 1 receptor b.
   
 
  0.553
ENSPLAP00000025309
Uncharacterized protein.
      
 0.515
tsr1
TSR1 ribosome maturation factor.
      
 0.511
dpy19l3
Dpy-19 like C-mannosyltransferase 3.
      
 0.511
dpy19l1
Dpy-19-like 1, like (H. sapiens).
      
 0.511
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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