foxf1 protein (Poecilia latipinna) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

foxf1

Forkhead box F1. (380 aa)

Predicted Functional Partners:

gata6

0.687

bmp4

0.649

gata4

0.628

nkx3-2

0.604

SPATA5

0.596

LOC106956268

0.596

hoxb6

0.596

gata5

0.572

nkx2-5

0.571

shh

0.543

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106956268	foxf1	ENSPLAP00000027857	ENSPLAP00000001001	Homeobox domain-containing protein.	Forkhead box F1.	0.596
LOC106956268	gata4	ENSPLAP00000027857	ENSPLAP00000016000	Homeobox domain-containing protein.	GATA binding protein 4.	0.521
LOC106956268	gata5	ENSPLAP00000027857	ENSPLAP00000014183	Homeobox domain-containing protein.	GATA binding protein 5.	0.521
LOC106956268	gata6	ENSPLAP00000027857	ENSPLAP00000016013	Homeobox domain-containing protein.	GATA binding protein 6.	0.521
LOC106956268	nkx2-5	ENSPLAP00000027857	ENSPLAP00000013697	Homeobox domain-containing protein.	NK2 homeobox 5.	0.528
LOC106956268	nkx3-2	ENSPLAP00000027857	ENSPLAP00000021928	Homeobox domain-containing protein.	NK3 homeobox 2.	0.528
SPATA5	foxf1	ENSPLAP00000011814	ENSPLAP00000001001	Spermatogenesis associated 5.	Forkhead box F1.	0.596
SPATA5	shh	ENSPLAP00000011814	ENSPLAP00000005941	Spermatogenesis associated 5.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.439
bmp4	foxf1	ENSPLAP00000019124	ENSPLAP00000001001	Bone morphogenetic protein 4.	Forkhead box F1.	0.649
bmp4	gata4	ENSPLAP00000019124	ENSPLAP00000016000	Bone morphogenetic protein 4.	GATA binding protein 4.	0.895
bmp4	gata5	ENSPLAP00000019124	ENSPLAP00000014183	Bone morphogenetic protein 4.	GATA binding protein 5.	0.534
bmp4	gata6	ENSPLAP00000019124	ENSPLAP00000016013	Bone morphogenetic protein 4.	GATA binding protein 6.	0.708
bmp4	nkx2-5	ENSPLAP00000019124	ENSPLAP00000013697	Bone morphogenetic protein 4.	NK2 homeobox 5.	0.540
bmp4	shh	ENSPLAP00000019124	ENSPLAP00000005941	Bone morphogenetic protein 4.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.911
foxf1	LOC106956268	ENSPLAP00000001001	ENSPLAP00000027857	Forkhead box F1.	Homeobox domain-containing protein.	0.596
foxf1	SPATA5	ENSPLAP00000001001	ENSPLAP00000011814	Forkhead box F1.	Spermatogenesis associated 5.	0.596
foxf1	bmp4	ENSPLAP00000001001	ENSPLAP00000019124	Forkhead box F1.	Bone morphogenetic protein 4.	0.649
foxf1	gata4	ENSPLAP00000001001	ENSPLAP00000016000	Forkhead box F1.	GATA binding protein 4.	0.628
foxf1	gata5	ENSPLAP00000001001	ENSPLAP00000014183	Forkhead box F1.	GATA binding protein 5.	0.572
foxf1	gata6	ENSPLAP00000001001	ENSPLAP00000016013	Forkhead box F1.	GATA binding protein 6.	0.687