STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001003Ubiquitin-like domain-containing protein. (96 aa)    
Predicted Functional Partners:
LOC106952860
Ubiquitin-conjugating enzyme E2 variant 1.
    
 0.999
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
ENSPLAP00000000046
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.998
rps4x
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.996
LOC106940296
Uncharacterized protein.
   
 0.996
rps6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.996
rps27a
Ribosomal protein S27a.
  
0.996
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 0.996
rps11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.995
rps9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.995
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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