STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106950582Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (154 aa)    
Predicted Functional Partners:
sod2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 0.990
ccs
Copper chaperone for superoxide dismutase.
 
0.976
cat
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.936
LOC106941633
Parkinsonism associated deglycase.
  
 0.927
PARK7
Protein deglycase DJ-1zDJ-1.
  
 0.927
ENSPLAP00000014192
NDK domain-containing protein.
  
 0.802
LOC106944734
Thioredoxin; Belongs to the thioredoxin family.
  
 0.796
LOC106944735
Thioredoxin; Belongs to the thioredoxin family.
  
 0.796
bcl2
BCL2 apoptosis regulator b.
    
 0.795
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 0.790
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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