Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001020TACI-CRD2 domain-containing protein. (245 aa)    
Predicted Functional Partners:
LOC106943871
TNF superfamily member 13b; Belongs to the tumor necrosis factor family.
    
 0.999
LOC106947091
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
  
 
 0.996
LOC106941329
Calcium modulating ligand.
    
 
 0.941
LOC106940936
Calcium modulating ligand.
    
 
 0.941
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.817
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.786
LOC106947210
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.771
LOC106956159
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.771
traf2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.771
clrn3
Clarin 3.
      
 0.574
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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