Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sfxn2Sidoreflexin. (378 aa)    
Predicted Functional Partners:
spg7
SPG7 matrix AAA peptidase subunit, paraplegin.
    
   0.823
sfxn4
Sideroflexin 4.
    
 
 0.686
LOC106939002
Si:ch211-68a17.7.
    
 
 0.674
LOC106960914
Solute carrier family 16 member 5a.
    
 
 0.673
treh
Trehalase.
      
 0.630
immt
MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
    
 
 0.597
eif6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
   
  
 0.574
LOC106947281
Cytochrome c oxidase assembly homolog 15 (yeast).
   
 
 0.551
mtbp
MDM2 binding protein.
      
 0.551
LOC106937486
Eukaryotic translation initiation factor 1B.
      
 0.542
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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