STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106964102TIMP metallopeptidase inhibitor 2a. (221 aa)    
Predicted Functional Partners:
mmp15
Matrix metallopeptidase 15b.
    
 0.923
LOC106934757
Matrix metallopeptidase 14b (membrane-inserted).
    
 0.923
mmp2
Matrix metallopeptidase 2.
   
 0.855
LOC106951598
ZnMc domain-containing protein.
   
 0.806
ENSPLAP00000011727
ZnMc domain-containing protein.
   
 0.806
ENSPLAP00000012039
ZnMc domain-containing protein.
   
 0.806
LOC106935241
Matrix metallopeptidase 13b.
   
 0.788
LOC106935246
Matrix metallopeptidase 20a (enamelysin).
   
 0.788
LOC106951599
Matrix metallopeptidase 30.
   
 0.787
LOC106935245
Matrix metallopeptidase 20b (enamelysin).
   
 0.787
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.