Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tbccd1TBCC domain containing 1. (588 aa)    
Predicted Functional Partners:
ppp2r3a
Protein phosphatase 2, regulatory subunit B'', alpha.
    
 
 0.892
LOC106934692
EF-hand domain-containing protein.
    
 
 0.892
gins1
GINS complex subunit 1 (Psf1 homolog).
      
 0.860
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
      
 0.851
icmt
Protein-S-isoprenylcysteine O-methyltransferase.
      
 0.850
LOC106960967
Protein phosphatase 2, regulatory subunit A, beta b.
    
   0.849
ppp2r3c
Protein phosphatase 2, regulatory subunit B'', gamma.
    
 
 0.840
ENSPLAP00000026406
Uncharacterized protein.
      
 0.836
LOC106954284
Tumor necrosis factor receptor superfamily, member 9a.
      
 0.720
LOC106941149
Serine/threonine-protein phosphatase.
    
   0.706
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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