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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001035Uncharacterized protein. (924 aa)    
Predicted Functional Partners:
ifih1
Interferon induced with helicase C domain 1.
   
 
 0.647
parp1
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
    
 
 0.634
n4bp1
Nedd4 binding protein 1.
    
 
 0.597
LOC106945510
KH and NYN domain containing.
    
 
 0.597
exosc5
Exosome component 5.
   
 
 0.588
exosc7
Exosome component 7.
    
 
 0.583
dhx58
DEXH (Asp-Glu-X-His) box polypeptide 58.
   
 
 0.563
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
  
 
  0.535
aifm1
Apoptosis inducing factor mitochondrion associated 1.
  
 0.534
larp7
La ribonucleoprotein domain family, member 7.
   
   0.526
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.