STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001035Uncharacterized protein. (924 aa)    
Predicted Functional Partners:
brix1
Brix domain containing 2.
    
   0.926
nol12
Nucleolar protein 12.
    
   0.907
gpatch4
G patch domain containing 4.
    
   0.891
n4bp1
Nedd4 binding protein 1.
    
 
 0.889
LOC106945510
KH and NYN domain containing.
    
 
 0.889
sltm
SAFB-like, transcription modulator.
    
   0.869
larp7
La ribonucleoprotein domain family, member 7.
   
   0.859
LOC106951698
DEAD (Asp-Glu-Ala-Asp) box helicase 24.
   
   0.858
LOC106953469
Ribosomal protein L26.
    
   0.852
pum3
Pumilio RNA-binding family member 3.
    
   0.846
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.