STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIMP3TIMP metallopeptidase inhibitor 3. (214 aa)    
Predicted Functional Partners:
adam17
ADAM metallopeptidase domain 17b.
    
 0.921
LOC106954181
ADAM metallopeptidase domain 17a.
    
 0.921
LOC106935241
Matrix metallopeptidase 13b.
   
 0.807
LOC106935246
Matrix metallopeptidase 20a (enamelysin).
   
 0.807
mmp2
Matrix metallopeptidase 2.
   
 0.807
LOC106951598
ZnMc domain-containing protein.
   
 0.807
ENSPLAP00000011727
ZnMc domain-containing protein.
   
 0.807
ENSPLAP00000012039
ZnMc domain-containing protein.
   
 0.807
LOC106951599
Matrix metallopeptidase 30.
   
 0.807
LOC106935245
Matrix metallopeptidase 20b (enamelysin).
   
 0.807
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.