Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nav2Neuron navigator 2a. (2290 aa)    
Predicted Functional Partners:
runx2
Runt-related transcription factor.
    
 0.710
LOC106937757
Bone morphogenetic protein 7b.
    
 0.619
LOC106943320
TGF_BETA_2 domain-containing protein.
    
 0.619
amdhd1
Amidohydrolase domain containing 1.
      
 0.609
gas2
Growth arrest-specific 2a.
    
 0.597
LOC106953268
Bone morphogenetic protein 7a.
    
 0.578
ing4
Inhibitor of growth protein.
    
 
 0.549
ing5
Inhibitor of growth protein.
    
 
 0.549
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.536
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.506
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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