dbx1 protein (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

dbx1

Developing brain homeobox 1a. (299 aa)

Predicted Functional Partners:

lrp4

0.680

slc6a5

0.656

prmt3

0.626

LOC106949498

0.564

htatip2

0.564

irx3

0.540

atoh7

0.521

sema3c

0.520

LOC106940739

0.508

LOC106936089

0.508

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106936089	dbx1	ENSPLAP00000021407	ENSPLAP00000001074	Neurturin.	Developing brain homeobox 1a.	0.508
LOC106940739	dbx1	ENSPLAP00000014995	ENSPLAP00000001074	Uncharacterized protein.	Developing brain homeobox 1a.	0.508
LOC106949498	dbx1	ENSPLAP00000013534	ENSPLAP00000001074	Cordon-bleu WH2 repeat protein.	Developing brain homeobox 1a.	0.564
atoh7	dbx1	ENSPLAP00000005697	ENSPLAP00000001074	Atonal bHLH transcription factor 7.	Developing brain homeobox 1a.	0.521
dbx1	LOC106936089	ENSPLAP00000001074	ENSPLAP00000021407	Developing brain homeobox 1a.	Neurturin.	0.508
dbx1	LOC106940739	ENSPLAP00000001074	ENSPLAP00000014995	Developing brain homeobox 1a.	Uncharacterized protein.	0.508
dbx1	LOC106949498	ENSPLAP00000001074	ENSPLAP00000013534	Developing brain homeobox 1a.	Cordon-bleu WH2 repeat protein.	0.564
dbx1	atoh7	ENSPLAP00000001074	ENSPLAP00000005697	Developing brain homeobox 1a.	Atonal bHLH transcription factor 7.	0.521
dbx1	htatip2	ENSPLAP00000001074	ENSPLAP00000019703	Developing brain homeobox 1a.	HIV-1 Tat interactive protein 2.	0.564
dbx1	irx3	ENSPLAP00000001074	ENSPLAP00000024555	Developing brain homeobox 1a.	Iroquois homeobox 3a.	0.540
dbx1	lrp4	ENSPLAP00000001074	ENSPLAP00000023984	Developing brain homeobox 1a.	Low density lipoprotein receptor-related protein 4.	0.680
dbx1	prmt3	ENSPLAP00000001074	ENSPLAP00000001081	Developing brain homeobox 1a.	Protein arginine methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.626
dbx1	sema3c	ENSPLAP00000001074	ENSPLAP00000020709	Developing brain homeobox 1a.	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C; Belongs to the semaphorin family.	0.520
dbx1	slc6a5	ENSPLAP00000001074	ENSPLAP00000001092	Developing brain homeobox 1a.	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	0.656
htatip2	dbx1	ENSPLAP00000019703	ENSPLAP00000001074	HIV-1 Tat interactive protein 2.	Developing brain homeobox 1a.	0.564
htatip2	lrp4	ENSPLAP00000019703	ENSPLAP00000023984	HIV-1 Tat interactive protein 2.	Low density lipoprotein receptor-related protein 4.	0.630
htatip2	prmt3	ENSPLAP00000019703	ENSPLAP00000001081	HIV-1 Tat interactive protein 2.	Protein arginine methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.812
htatip2	slc6a5	ENSPLAP00000019703	ENSPLAP00000001092	HIV-1 Tat interactive protein 2.	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	0.543
irx3	dbx1	ENSPLAP00000024555	ENSPLAP00000001074	Iroquois homeobox 3a.	Developing brain homeobox 1a.	0.540
lrp4	dbx1	ENSPLAP00000023984	ENSPLAP00000001074	Low density lipoprotein receptor-related protein 4.	Developing brain homeobox 1a.	0.680