STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scarf2Uncharacterized protein. (939 aa)    
Predicted Functional Partners:
slc7a4
Solute carrier family 7 member 4.
    
 0.621
LOC106940496
Interleukin-1.
    
 0.608
ENSPLAP00000001020
TACI-CRD2 domain-containing protein.
    
 0.607
LOC106936432
TIR domain-containing protein.
    
  0.562
LOC106936436
Zmp:0000000936.
    
  0.562
LOC106936431
Uncharacterized protein.
    
  0.562
LOC106952591
DAB adaptor protein 1a.
   
 0.523
LOC106946524
Si:ch211-188c16.1.
   
 0.523
c8b
Complement component 8, beta polypeptide.
   
 0.523
dab1
DAB adaptor protein 1b.
   
 0.523
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.