Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rftn2Raftlin family member 2. (438 aa)    
Predicted Functional Partners:
arl6ip6
Uncharacterized protein.
      
 0.713
n6amt1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.710
LOC106961629
Uncharacterized protein.
      
 0.676
LOC106948134
Chloride intracellular channel 3.
      
 0.656
LOC106943850
Motile sperm domain containing 2.
      
 0.643
OTOP1
Otopetrin 1.
      
 0.616
LOC106957123
A kinase (PRKA) anchor protein 6.
      
 0.521
sdsl
Serine dehydratase-like.
      
 0.520
SDS
Serine dehydratase.
      
 0.520
ZNF503
Zinc finger protein 503.
      
 0.445
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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