STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc6a5Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (765 aa)    
Predicted Functional Partners:
LOC106937382
Coiled-coil domain containing 85A, like.
      
 0.594
CCDC85A
Coiled-coil domain containing 85A.
      
 0.594
gad2
Glutamate decarboxylase 2.
  
  
 0.565
LOC106962429
Amino acid transporter.
  
 
 0.561
slc17a6
Solute carrier family 17 member 6.
      
 0.553
LOC106953454
Amino acid transporter.
    
 0.550
LOC106942541
Amino acid transporter.
    
 0.550
LOC106947769
Amino acid transporter.
    
 0.548
slc1a2
Amino acid transporter.
  
 
 0.516
LOC106951471
Amino acid transporter.
  
 
 0.516
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.