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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spdyaSpeedy/RINGO cell cycle regulator family member A. (306 aa)    
Predicted Functional Partners:
cdk1
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
    
 0.962
LOC106954702
Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily.
    
 0.938
CDC25B
Cell division cycle 25B.
   
 
  0.778
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 
 0.752
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 
 0.752
myo6
Myosin VIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.701
LOC106941339
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.701
cdk6
Cyclin-dependent kinase 6; Belongs to the protein kinase superfamily.
    
 0.690
LOC106961113
Cyclin-dependent kinase 4; Belongs to the protein kinase superfamily.
    
 0.690
auts2
Activator of transcription and developmental regulator AUTS2 a.
   
 
  0.571
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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