Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001108Uncharacterized protein. (111 aa)    
Predicted Functional Partners:
psme3ip1
Family with sequence similarity 192 member A.
    
 
 0.831
psme3
Proteasome activator subunit 3.
    
   0.765
gmnn
Geminin DNA replication inhibitor.
      
 0.430
dnajc8
DnaJ (Hsp40) homolog, subfamily C, member 8.
      
 0.427
coq4
Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides; Belongs to the COQ4 family.
      
 0.423
LOC106936253
Phosphatidylinositol transfer protein, alpha b.
      
 0.412
PITPNB
Phosphatidylinositol transfer protein beta.
      
 0.412
mn1
Meningioma 1b.
      
 0.412
LOC106947462
Phosphatidylinositol transfer protein, beta.
      
 0.412
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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