STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106942093Anion exchange protein. (728 aa)    
Predicted Functional Partners:
kank1
KN motif and ankyrin repeat domains 1.
    
 0.600
slc26a6
Solute carrier family 26 member 6.
     
 0.478
arhgap1
Uncharacterized protein.
     
 0.469
dnali1
Dynein, axonemal, light intermediate chain 1.
   
  
 0.468
LOC106957901
Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
     
 0.463
nphs2
NPHS2 stomatin family member, podocin.
    
 0.454
LOC106945113
N-ethylmaleimide-sensitive factor b; Belongs to the AAA ATPase family.
   
  0.437
nsf
Uncharacterized protein.
   
  0.437
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.437
ENSPLAP00000028939
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
    
  0.437
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.