Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
atminATM interactor. (798 aa)    
Predicted Functional Partners:
ubr5
Ubiquitin protein ligase E3 component n-recognin 5.
    
 
 0.908
atm
ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 0.892
LOC106955037
Dynein light chain.
    
 0.835
LOC106956812
Dynein light chain.
    
 0.835
LOC106947523
Dynein light chain.
    
 0.835
LOC106941779
WRN helicase interacting protein 1.
    
 
 0.624
ENSPLAP00000023274
WRN helicase interacting protein 1.
    
 
 0.624
fan1
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
      
 0.623
ENSPLAP00000014192
NDK domain-containing protein.
    
 0.577
chek2
Checkpoint kinase 2.
    
 
 0.574
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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