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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106957184Uncharacterized protein. (271 aa)    
Predicted Functional Partners:
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.809
LOC106956946
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.809
myo3a
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.739
myo3b
Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.739
LOC106949858
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.721
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.721
ENSPLAP00000031021
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.680
xpc
Xeroderma pigmentosum, complementation group C.
    
 0.678
wdr90
WD repeat domain 90.
   
 0.660
guca1b
Guanylate cyclase activator 1B.
    
 0.621
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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