Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
psmd10Proteasome 26S subunit, non-ATPase 10. (226 aa)    
Predicted Functional Partners:
psmc1
Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.
  
 0.997
psmd13
Proteasome 26S subunit, non-ATPase 13.
    
 0.997
psmc4
Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.
  
 0.997
psmd7
Proteasome 26S subunit, non-ATPase 7.
   
 0.996
psmc2
Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.
   
 0.996
psmc3
Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.
  
 0.996
psmd8
Proteasome 26S subunit, non-ATPase 8.
   
 0.996
psmd12
Proteasome 26S subunit, non-ATPase 12.
    
 0.996
psmc5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
   
 0.996
psmc6
Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.
  
 0.996
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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